Sequence Similarity Clusters for the Entities in PDB 1GFW

Entity #1 | Chains: A
CASPASE-3 (APOPAIN, P20) protein, length: 147 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 34 37 751
95 % 37 40 916 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.4
PDBFlex
90 % 37 40 949
70 % 37 40 979
50 % 38 41 993
40 % 43 48 764
30 % 43 48 755
Entity #2 | Chains: B
CASPASE-3 (APOPAIN, P10) protein, length: 97 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 47265
95 % 35 39 918 Flexibility: No
Max RMSD: 3.6, Avg RMSD: 0.4
PDBFlex
90 % 38 42 838
70 % 38 42 873
50 % 57 66 447
40 % 57 67 473
30 % 70 83 328

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.