Sequence Similarity Clusters for the Entities in PDB 1GFW

Entity #1 | Chains: A
CASPASE-3 (APOPAIN, P20) protein, length: 147 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 34 37 714
95 % 37 40 879
90 % 37 40 913
70 % 37 40 939
50 % 38 41 948
40 % 43 48 712
30 % 43 48 704
Entity #2 | Chains: B
CASPASE-3 (APOPAIN, P10) protein, length: 97 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 45292
95 % 35 39 883
90 % 38 42 805
70 % 38 42 848
50 % 57 66 426
40 % 57 67 450
30 % 70 83 315

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.