Sequence Similarity Clusters for the Entities in PDB 1GFN

Entity #1 | Chains: A
MATRIX PORIN OUTER MEMBRANE PROTEIN F protein, length: 334 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 53754
95 % 20 32 513 Flexibility: No
Max RMSD: 1.1, Avg RMSD: 0.4
PDBFlex
90 % 20 32 543
70 % 20 32 583
50 % 27 53 317
40 % 27 53 337
30 % 27 53 346

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.