Sequence Similarity Clusters for the Entities in PDB 1GFM

Entity #1 | Chains: A
MATRIX PORIN OUTER MEMBRANE PROTEIN F protein, length: 340 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 50702
95 % 25 32 425
90 % 25 32 450
70 % 25 32 497
50 % 36 53 290
40 % 36 53 310
30 % 36 53 319

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.