Sequence Similarity Clusters for the Entities in PDB 1GFL

Entity #1 | Chains: A,B
GREEN FLUORESCENT PROTEIN protein, length: 238 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 39834
95 % 199 272 63 Flexibility: Low
Max RMSD: 4.4, Avg RMSD: 0.6
PDBFlex
90 % 211 315 33
70 % 214 320 41
50 % 214 322 78
40 % 219 335 89
30 % 346 555 15

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures