Sequence Similarity Clusters for the Entities in PDB 1GFL

Entity #1 | Chains: A,B
GREEN FLUORESCENT PROTEIN protein, length: 238 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 37876
95 % 187 254 70 Flexibility: Low
Max RMSD: 4.4, Avg RMSD: 0.6
PDBFlex
90 % 197 311 36
70 % 202 300 32
50 % 202 302 78
40 % 207 315 95
30 % 330 530 14

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures