Sequence Similarity Clusters for the Entities in PDB 1GEQ

Entity #1 | Chains: A,B
TRYPTOPHAN SYNTHASE ALPHA-SUBUNIT protein, length: 248 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 3811
95 % 1 11 1833 Flexibility: Low
Max RMSD: 0.9, Avg RMSD: 0.5
PDBFlex
90 % 1 11 1876
70 % 1 11 1891
50 % 1 11 1898
40 % 48 93 310
30 % 48 95 321

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.