Sequence Similarity Clusters for the Entities in PDB 1GEN

Entity #1 | Chains: A
GELATINASE A protein, length: 218 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 40670
95 % 1 2 31094 Flexibility: Low
Max RMSD: 1.8, Avg RMSD: 1.8
PDBFlex
90 % 1 2 29868
70 % 1 2 26748
50 % 1 2 22829
40 % 1 2 20097
30 % 2 6 8177

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures