Sequence Similarity Clusters for the Entities in PDB 1GEN

Entity #1 | Chains: A
GELATINASE A protein, length: 218 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 40172
95 % 1 2 30720 Flexibility: Low
Max RMSD: 1.8, Avg RMSD: 1.8
PDBFlex
90 % 1 2 29515
70 % 1 2 26471
50 % 1 2 22594
40 % 1 2 19894
30 % 2 6 8087

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.