Sequence Similarity Clusters for the Entities in PDB 1GEF

Entity #1 | Chains: A,B,D,E
HOLLIDAY JUNCTION RESOLVASE protein, length: 123 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 13987
95 % 1 2 13275 Flexibility: Low
Max RMSD: 2.1, Avg RMSD: 1.4
PDBFlex
90 % 1 2 13061
70 % 1 2 12287
50 % 1 2 10962
40 % 1 2 9932
30 % 4 8 3206

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures