Sequence Similarity Clusters for the Entities in PDB 1GEF

Entity #1 | Chains: A,B,D,E
HOLLIDAY JUNCTION RESOLVASE protein, length: 123 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 13232
95 % 1 2 12588 Flexibility: Low
Max RMSD: 2.1, Avg RMSD: 1.5
PDBFlex
90 % 1 2 12382
70 % 1 2 11630
50 % 1 2 10408
40 % 1 2 9433
30 % 4 8 3061

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.