Sequence Similarity Clusters for the Entities in PDB 1GEE

Entity #1 | Chains: A,B,E,F
GLUCOSE 1-DEHYDROGENASE protein, length: 261 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 10729
95 % 1 4 4440 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.3
PDBFlex
90 % 1 4 4482
70 % 1 9 2292
50 % 1 9 2272
40 % 66 342 11
30 % 148 928 4

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1GEE 1 A, B, E, F GLUCOSE 1-DEHYDROGENASE 1404 1.1.1.47 | Details
2 1GCO 1 A, B, E, F GLUCOSE DEHYDROGENASE 1404 1.1.1.47 | Details
3 1G6K 1 A, B, E, F GLUCOSE 1-DEHYDROGENASE 1404 1.1.1.47 | Details
4 1RWB 1 A, B, E, F Glucose 1-dehydrogenase 1404 1.1.1.47 | Details