Sequence Similarity Clusters for the Entities in PDB 1GEE

Entity #1 | Chains: A,B,E,F
GLUCOSE 1-DEHYDROGENASE protein, length: 261 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 20584
95 % 1 4 4188 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.3
PDBFlex
90 % 1 4 4218
70 % 1 9 2183
50 % 1 9 2171
40 % 53 282 14
30 % 138 886 4

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures