Sequence Similarity Clusters for the Entities in PDB 1GDX

Entity #1 | Chains: A
LYSOZYME C protein, length: 130 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 95 140 200
95 % 135 207 143 Flexibility: No
Max RMSD: 3.0, Avg RMSD: 0.5
PDBFlex
90 % 135 207 154
70 % 530 974 7
50 % 530 982 8
40 % 533 1017 10
30 % 533 1017 20

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures