Sequence Similarity Clusters for the Entities in PDB 1GDX

Entity #1 | Chains: A
LYSOZYME C protein, length: 130 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 68751
95 % 135 207 142 Flexibility: No
Max RMSD: 3.0, Avg RMSD: 0.4
PDBFlex
90 % 135 207 151
70 % 518 961 7
50 % 518 969 8
40 % 521 1003 11
30 % 521 1003 20

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures