Sequence Similarity Clusters for the Entities in PDB 1GDQ

Entity #1 | Chains: A
TRYPSIN protein, length: 224 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 8 17 2818
95 % 8 17 3534
90 % 8 17 3579
70 % 8 17 3527
50 % 8 17 3447
40 % 19 1617 4
30 % 19 1759 6
Entity #2 | Chains: B
GLY-ALA-ARG protein, length: 3 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.