Sequence Similarity Clusters for the Entities in PDB 1GDN

Entity #1 | Chains: A
TRYPSIN protein, length: 224 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 17 2961
95 % 3 17 3690
90 % 3 17 3740
70 % 3 17 3680
50 % 3 17 3600
40 % 8 1684 4
30 % 8 1833 6
Entity #2 | Chains: B
GLY-ALA-LYS protein, length: 3 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.