Sequence Similarity Clusters for the Entities in PDB 1GDJ

Entity #1 | Chains: A
LEGHEMOGLOBIN (DEOXY) protein, length: 153 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 17 2917
95 % 2 17 3650 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.6
PDBFlex
90 % 2 17 3696
70 % 2 17 3641
50 % 2 19 2833
40 % 2 27 1240
30 % 2 27 1216

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.