Sequence Similarity Clusters for the Entities in PDB 1GDI

Entity #1 | Chains: A
LEGHEMOGLOBIN (CARBONMONOXY) protein, length: 153 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 17 2938
95 % 4 17 3670 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.6
PDBFlex
90 % 4 17 3716
70 % 4 17 3658
50 % 4 19 2855
40 % 4 27 1245
30 % 4 27 1222

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.