Sequence Similarity Clusters for the Entities in PDB 1GDI

Entity #1 | Chains: A
LEGHEMOGLOBIN (CARBONMONOXY) protein, length: 153 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 17 3044
95 % 4 17 3781 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.6
PDBFlex
90 % 4 17 3831
70 % 4 17 3776
50 % 4 19 2933
40 % 4 27 1279
30 % 4 27 1251

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.