Sequence Similarity Clusters for the Entities in PDB 1GDH

Entity #1 | Chains: A,B
D-GLYCERATE DEHYDROGENASE protein, length: 320 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 35084
95 % 1 1 27659 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.3
PDBFlex
90 % 1 1 26728
70 % 1 1 24238
50 % 1 1 20852
40 % 1 1 18427
30 % 55 80 219

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.