Sequence Similarity Clusters for the Entities in PDB 1GDH

Entity #1 | Chains: A,B
D-GLYCERATE DEHYDROGENASE protein, length: 320 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 36693
95 % 1 1 28878 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.3
PDBFlex
90 % 1 1 27873
70 % 1 1 25155
50 % 1 1 21590
40 % 1 1 19066
30 % 55 81 231

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures