Sequence Similarity Clusters for the Entities in PDB 1GDE

Entity #1 | Chains: A,B
ASPARTATE AMINOTRANSFERASE protein, length: 389 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 18125
95 % 1 3 11510 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.3
PDBFlex
90 % 1 3 11353
70 % 1 3 10737
50 % 1 3 9678
40 % 3 18 1210
30 % 20 71 314

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.