Sequence Similarity Clusters for the Entities in PDB 1GD9

Entity #1 | Chains: A,B
ASPARTATE AMINOTRANSFERASE protein, length: 389 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 18561
95 % 2 3 11734 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.3
PDBFlex
90 % 2 3 11575
70 % 2 3 10951
50 % 2 3 9869
40 % 5 18 1237
30 % 23 75 303

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures