Sequence Similarity Clusters for the Entities in PDB 1GD1

Entity #1 | Chains: O,P,Q,R
HOLO-D-GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE protein, length: 334 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 4751
95 % 2 11 1165 Flexibility: No
Max RMSD: 1.0, Avg RMSD: 0.4
PDBFlex
90 % 2 11 1191
70 % 2 11 1222
50 % 11 139 69
40 % 11 139 88
30 % 11 139 100

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.