Sequence Similarity Clusters for the Entities in PDB 1GCZ

Entity #1 | Chains: A,B,C
MACROPHAGE MIGRATION INHIBITORY FACTOR protein, length: 122 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 57 78 102
95 % 62 85 116 Flexibility: No
Max RMSD: 3.4, Avg RMSD: 0.5
PDBFlex
90 % 62 85 120
70 % 64 89 133
50 % 64 90 159
40 % 65 91 166
30 % 75 111 138

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures