Sequence Similarity Clusters for the Entities in PDB 1GCT

Entity #1 | Chains: A
GAMMA-CHYMOTRYPSIN A protein, length: 13 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: B
GAMMA-CHYMOTRYPSIN A protein, length: 131 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 38 804
95 % 5 38 1100 Flexibility: No
Max RMSD: 0.8, Avg RMSD: 0.5
PDBFlex
90 % 5 38 1120
70 % 5 40 1114
50 % 5 40 1154
40 % 5 42 1120
30 % 5 50 960
Entity #3 | Chains: C
GAMMA-CHYMOTRYPSIN A protein, length: 97 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 38 805
95 % 5 38 1102 Flexibility: No
Max RMSD: 1.5, Avg RMSD: 0.5
PDBFlex
90 % 5 38 1123
70 % 5 40 1117
50 % 5 43 1081
40 % 5 52 957
30 % 5 52 932
Entity #4 | Chains: D
TETRAPEPTIDE ADDUCT protein, length: 5 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.