Sequence Similarity Clusters for the Entities in PDB 1GCT

Entity #1 | Chains: A
GAMMA-CHYMOTRYPSIN A protein, length: 13 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: B
GAMMA-CHYMOTRYPSIN A protein, length: 131 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 38 1015
95 % 5 38 1230 Flexibility: No
Max RMSD: 0.8, Avg RMSD: 0.5
PDBFlex
90 % 5 38 1253
70 % 5 40 1238
50 % 5 40 1277
40 % 5 46 1162
30 % 5 54 998
Entity #3 | Chains: C
GAMMA-CHYMOTRYPSIN A protein, length: 97 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 38 1036
95 % 5 38 1249 Flexibility: No
Max RMSD: 1.5, Avg RMSD: 0.4
PDBFlex
90 % 5 38 1271
70 % 5 40 1247
50 % 5 47 1130
40 % 5 56 970
30 % 5 56 962
Entity #4 | Chains: D
TETRAPEPTIDE ADDUCT protein, length: 5 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures