Sequence Similarity Clusters for the Entities in PDB 1GCQ

Entity #1 | Chains: A,B
GROWTH FACTOR RECEPTOR-BOUND PROTEIN 2 protein, length: 61 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 5 14238
95 % 4 7 9998 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.7
PDBFlex
90 % 4 7 9874
70 % 4 7 9379
50 % 5 14 3547
40 % 81 285 122
30 % 193 1040 9
Entity #2 | Chains: C
VAV PROTO-ONCOGENE protein, length: 70 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 16124
95 % 1 2 15108 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 0.8
PDBFlex
90 % 1 2 14829
70 % 1 2 13899
50 % 1 2 12339
40 % 1 2 11180
30 % 1 2 9715

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.