Sequence Similarity Clusters for the Entities in PDB 1GCP

Entity #1 | Chains: A,B,C,D
VAV PROTO-ONCOGENE protein, length: 70 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 16945
95 % 2 2 14414 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 0.8
PDBFlex
90 % 2 2 14144
70 % 2 2 14396
50 % 2 2 12710
40 % 2 2 11404
30 % 2 2 9681

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures