Sequence Similarity Clusters for the Entities in PDB 1GCP

Entity #1 | Chains: A,B,C,D
VAV PROTO-ONCOGENE protein, length: 70 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 16785
95 % 2 2 15637 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 0.8
PDBFlex
90 % 2 2 15350
70 % 2 2 14382
50 % 2 2 12741
40 % 2 2 11528
30 % 2 2 10018

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures