Sequence Similarity Clusters for the Entities in PDB 1GCM

Entity #1 | Chains: A,B,C
GCN4P-II protein, length: 34 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 30858
95 % 1 3 15484 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.8
PDBFlex
90 % 1 3 15204
70 % 19 99 156
50 % 21 114 163
40 % 21 114 176
30 % 21 114 190

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures