Sequence Similarity Clusters for the Entities in PDB 1GCM

Entity #1 | Chains: A,B,C
GCN4P-II protein, length: 34 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 30175
95 % 1 3 15161 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.8
PDBFlex
90 % 1 3 14877
70 % 19 99 147
50 % 21 114 153
40 % 21 114 170
30 % 21 114 186

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.