Sequence Similarity Clusters for the Entities in PDB 1GCL

Entity #1 | Chains: A,B,C,D
GCN4 protein, length: 34 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 9 2358
95 % 4 9 2646 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.6
PDBFlex
90 % 4 9 2716
70 % 37 98 160
50 % 40 108 181
40 % 40 108 192
30 % 40 108 216

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 2CCN 1 A, B GENERAL CONTROL PROTEIN GCN4 RESIDUES 249-281 4932
2 1GCM 1 A, B, C GCN4P-II 4932
3 2CCF 1 A, B GENERAL CONTROL PROTEIN GCN4 RESIDUES 249-281 4932
4 1GCL 1 A, B, C, D GCN4 4932
5 2OXK 1 A hybrid alpha/beta peptide based on the GCN4-pLI sequence; heptad positions b and f substituted with beta-amino acids
6 1W5K 1 A, B, C, D GENERAL CONTROL PROTEIN GCN4 4932
7 1UO2 1 A, B GENERAL CONTROL PROTEIN GCN4 DIMER ASYMMETRIC UNIT OF FOUR HELIX BUNDLE 4932
8 2CCE 1 A, B GENERAL CONTROL PROTEIN GCN4 RESIDUES 249-281 4932
9 1W5J 1 A, B, C, D GENERAL CONTROL PROTEIN GCN4 4932