Sequence Similarity Clusters for the Entities in PDB 1GCD

Entity #1 | Chains: A
GAMMA-CHYMOTRYPSIN protein, length: 245 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 11 26 808
95 % 11 26 1105 Flexibility: Low
Max RMSD: 1.8, Avg RMSD: 0.7
PDBFlex
90 % 11 26 1124
70 % 11 26 1168
50 % 11 26 1208
40 % 904 1696 4
30 % 963 1846 6

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.