Sequence Similarity Clusters for the Entities in PDB 1GCA

Entity #1 | Chains: A
GLUCOSE/GALACTOSE-BINDING PROTEIN protein, length: 309 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 4 15528
95 % 1 4 14590 Flexibility: Low
Max RMSD: 0.9, Avg RMSD: 0.5
PDBFlex
90 % 8 13 4913
70 % 9 14 4487
50 % 10 15 4007
40 % 10 15 3831
30 % 36 62 581

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures