Sequence Similarity Clusters for the Entities in PDB 1GC8

Entity #1 | Chains: A,B
3-ISOPROPYLMALATE DEHYDROGENASE protein, length: 345 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 6 6662
95 % 13 21 1464 Flexibility: Low
Max RMSD: 3.4, Avg RMSD: 1.5
PDBFlex
90 % 15 23 1410
70 % 15 23 1422
50 % 39 52 506
40 % 47 84 272
30 % 75 134 219

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures