Sequence Similarity Clusters for the Entities in PDB 1GC8

Entity #1 | Chains: A,B
3-ISOPROPYLMALATE DEHYDROGENASE protein, length: 345 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 33956
95 % 13 21 1348 Flexibility: Low
Max RMSD: 3.4, Avg RMSD: 1.4
PDBFlex
90 % 15 23 1314
70 % 15 23 1330
50 % 39 52 464
40 % 47 82 248
30 % 74 130 200

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.