Sequence Similarity Clusters for the Entities in PDB 1GC2

Entity #1 | Chains: A,B,C,D
METHIONINE GAMMA-LYASE protein, length: 398 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 8 1266
95 % 10 15 897 Flexibility: Low
Max RMSD: 1.9, Avg RMSD: 0.7
PDBFlex
90 % 10 15 934
70 % 10 15 966
50 % 25 33 716
40 % 46 68 227
30 % 55 80 210

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.