Sequence Similarity Clusters for the Entities in PDB 1GC2

Entity #1 | Chains: A,B,C,D
METHIONINE GAMMA-LYASE protein, length: 398 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 8 1217
95 % 10 15 875 Flexibility: Low
Max RMSD: 1.9, Avg RMSD: 0.8
PDBFlex
90 % 10 15 910
70 % 10 15 942
50 % 25 33 674
40 % 46 65 235
30 % 55 77 209

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.