Sequence Similarity Clusters for the Entities in PDB 1GC0

Entity #1 | Chains: A,B,C,D
METHIONINE GAMMA-LYASE protein, length: 398 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 8 1622
95 % 6 15 985 Flexibility: Low
Max RMSD: 2.7, Avg RMSD: 1.1
PDBFlex
90 % 6 15 1007
70 % 6 15 1046
50 % 17 43 534
40 % 25 74 219
30 % 30 82 229

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 5X30 1 A, C L-methionine gamma-lyase 303 4.4.1.11 | Details
2 5X30 2 B, D L-methionine gamma-lyase 303 4.4.1.11 | Details
3 5X2Y 1 A, B, C, D L-methionine gamma-lyase 303 4.4.1.11 | Details
4 2O7C 1 A, B, C, D Methionine gamma-lyase 303 4.4.1.11 | Details
5 5X2Z 1 A, B, C, D L-methionine gamma-lyase 303 4.4.1.11 | Details
6 1GC0 1 A, B, C, D METHIONINE GAMMA-LYASE 303 4.4.1.11 | Details
7 1UKJ 1 A, B, C, D Methionine gamma-lyase 303 4.4.1.11 | Details
8 5X2X 1 A, B, C, D L-methionine gamma-lyase 303 4.4.1.11 | Details
9 3VK3 1 A, B, C, D Methionine gamma-lyase 303 4.4.1.11 | Details
10 1GC2 1 A, B, C, D METHIONINE GAMMA-LYASE 303 4.4.1.11 | Details
11 3VK2 1 A, B, C, D Methionine gamma-lyase 303 4.4.1.11 | Details
12 5X2V 1 A, B, C, D L-methionine gamma-lyase 303 4.4.1.11 | Details
13 1PG8 1 A, B, C, D Methionine gamma-lyase 303 4.4.1.11 | Details
14 3VK4 1 A, B, C, D Methionine gamma-lyase 303 4.4.1.11 | Details
15 5X2W 1 A, B, C, D L-methionine gamma-lyase 303 4.4.1.11 | Details