Sequence Similarity Clusters for the Entities in PDB 1GC0

Entity #1 | Chains: A,B,C,D
METHIONINE GAMMA-LYASE protein, length: 398 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 8 1604
95 % 6 15 976 Flexibility: Low
Max RMSD: 2.7, Avg RMSD: 1.1
PDBFlex
90 % 6 15 1001
70 % 6 15 1036
50 % 17 43 528
40 % 25 74 219
30 % 30 82 226

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 2O7C 1 A, B, C, D Methionine gamma-lyase 303 4.4.1.11 | Details
2 1GC0 1 A, B, C, D METHIONINE GAMMA-LYASE 303 4.4.1.11 | Details
3 1UKJ 1 A, B, C, D Methionine gamma-lyase 303 4.4.1.11 | Details
4 5X2X 1 A, B, C, D L-methionine gamma-lyase 303 4.4.1.11 | Details
5 1GC2 1 A, B, C, D METHIONINE GAMMA-LYASE 303 4.4.1.11 | Details
6 5X2V 1 A, B, C, D L-methionine gamma-lyase 303 4.4.1.11 | Details
7 1PG8 1 A, B, C, D Methionine gamma-lyase 303 4.4.1.11 | Details
8 5X2W 1 A, B, C, D L-methionine gamma-lyase 303 4.4.1.11 | Details