Sequence Similarity Clusters for the Entities in PDB 1GC0

Entity #1 | Chains: A,B,C,D
METHIONINE GAMMA-LYASE protein, length: 398 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 8 1718
95 % 6 15 1053 Flexibility: Low
Max RMSD: 2.7, Avg RMSD: 1.1
PDBFlex
90 % 6 15 1077
70 % 6 15 1106
50 % 18 44 567
40 % 26 75 241
30 % 31 83 243

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 2O7C 1 A, B, C, D Methionine gamma-lyase 303 4.4.1.11 | Details
2 1GC0 1 A, B, C, D METHIONINE GAMMA-LYASE 303 4.4.1.11 | Details
3 1UKJ 1 A, B, C, D Methionine gamma-lyase 303 4.4.1.11 | Details
4 5X2X 1 A, B, C, D L-methionine gamma-lyase 303 4.4.1.11 | Details
5 1GC2 1 A, B, C, D METHIONINE GAMMA-LYASE 303 4.4.1.11 | Details
6 5X2V 1 A, B, C, D L-methionine gamma-lyase 303 4.4.1.11 | Details
7 1PG8 1 A, B, C, D Methionine gamma-lyase 303 4.4.1.11 | Details
8 5X2W 1 A, B, C, D L-methionine gamma-lyase 303 4.4.1.11 | Details