Sequence Similarity Clusters for the Entities in PDB 1GBS

Entity #1 | Chains: A
AUSTRALIAN BLACK SWAN EGG WHITE LYSOZYME protein, length: 185 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 42583
95 % 1 4 19042 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.3
PDBFlex
90 % 1 4 18548
70 % 1 5 11762
50 % 2 9 3999
40 % 2 9 3827
30 % 2 9 3564

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures