Sequence Similarity Clusters for the Entities in PDB 1GBN

Entity #1 | Chains: A,B,C
ORNITHINE AMINOTRANSFERASE protein, length: 402 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 5 3705
95 % 4 7 3018 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.3
PDBFlex
90 % 4 7 3059
70 % 4 7 3022
50 % 15 20 1064
40 % 15 20 1080
30 % 133 160 137

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures