1GAU

SOLUTION STRUCTURE OF THE SPECIFIC DNA COMPLEX OF THE ZINC CONTAINING DNA BINDING DOMAIN OF THE ERYTHROID TRANSCRIPTION FACTOR GATA-1 BY MULTIDIMENSIONAL NMR


Sequence Similarity Clusters for the Entities in PDB 1GAU

Entity #1 | Chains: B
DNA (5'-D(P*AP*GP*AP*TP*AP*AP*AP*C)-3') dna, length: 8 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: C
DNA (5'-D(P*GP*TP*TP*TP*AP*TP*CP*T)-3') dna, length: 8 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: A
ERYTHROID TRANSCRIPTION FACTOR GATA-1 protein, length: 60 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 4 24797
95 % 4 4 21144
90 % 4 4 20547
70 % 7 7 7869
50 % 7 7 7255
40 % 7 7 6744
30 % 7 7 6011

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures