1GAU

SOLUTION STRUCTURE OF THE SPECIFIC DNA COMPLEX OF THE ZINC CONTAINING DNA BINDING DOMAIN OF THE ERYTHROID TRANSCRIPTION FACTOR GATA-1 BY MULTIDIMENSIONAL NMR


Sequence Similarity Clusters for the Entities in PDB 1GAU

Entity #1 | Chains: B
DNA (5'-D(P*AP*GP*AP*TP*AP*AP*AP*C)-3') dna, length: 8 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: C
DNA (5'-D(P*GP*TP*TP*TP*AP*TP*CP*T)-3') dna, length: 8 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: A
ERYTHROID TRANSCRIPTION FACTOR GATA-1 protein, length: 60 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 4 24097
95 % 4 4 20580
90 % 4 4 20010
70 % 7 7 7667
50 % 7 7 7067
40 % 7 7 6567
30 % 7 7 5855

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.