Sequence Similarity Clusters for the Entities in PDB 1GAQ

Entity #1 | Chains: A,C
FERREDOXIN-NADP+ REDUCTASE protein, length: 314 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 16939
95 % 2 4 6016
90 % 2 4 6017
70 % 17 22 1255
50 % 51 57 602
40 % 51 57 640
30 % 52 59 563
Entity #2 | Chains: B
FERREDOXIN I protein, length: 98 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 4 12408
95 % 4 6 5384
90 % 4 6 5388
70 % 29 41 695
50 % 34 46 682
40 % 34 46 727
30 % 34 47 715

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.