Sequence Similarity Clusters for the Entities in PDB 1GAQ

Entity #1 | Chains: A,C
FERREDOXIN-NADP+ REDUCTASE protein, length: 314 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 17424
95 % 2 4 6196
90 % 2 4 6199
70 % 17 22 1293
50 % 51 57 622
40 % 51 57 664
30 % 52 59 592
Entity #2 | Chains: B
FERREDOXIN I protein, length: 98 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 4 12785
95 % 4 6 5541
90 % 4 6 5544
70 % 31 43 712
50 % 36 48 669
40 % 36 48 711
30 % 36 49 701

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.