Sequence Similarity Clusters for the Entities in PDB 1GAQ

Entity #1 | Chains: A,C
FERREDOXIN-NADP+ REDUCTASE protein, length: 314 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 18892
95 % 2 4 6743
90 % 2 4 6729
70 % 17 22 1384
50 % 63 69 573
40 % 63 69 611
30 % 64 71 558
Entity #2 | Chains: B
FERREDOXIN I protein, length: 98 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 4 13790
95 % 4 6 6023
90 % 4 6 6014
70 % 33 45 705
50 % 38 50 683
40 % 38 50 713
30 % 38 51 688

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.