Sequence Similarity Clusters for the Entities in PDB 1GAM

Entity #1 | Chains: A,B
GAMMA B CRYSTALLIN protein, length: 86 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 48452
95 % 2 2 24965 Flexibility: Low
Max RMSD: 0.7, Avg RMSD: 0.6
PDBFlex
90 % 2 2 24145
70 % 2 2 21950
50 % 4 4 9311
40 % 4 4 8513
30 % 8 10 3025

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures