Sequence Similarity Clusters for the Entities in PDB 1GAM

Entity #1 | Chains: A,B
GAMMA B CRYSTALLIN protein, length: 86 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 41907
95 % 2 2 25207 Flexibility: Low
Max RMSD: 0.7, Avg RMSD: 0.6
PDBFlex
90 % 2 2 24337
70 % 2 2 22083
50 % 4 4 9260
40 % 4 4 8377
30 % 17 20 1054

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures