Sequence Similarity Clusters for the Entities in PDB 1GA1

Entity #1 | Chains: A
SERINE-CARBOXYL PROTEINASE protein, length: 372 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 9 8406
95 % 5 9 8456 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.2
PDBFlex
90 % 5 9 8387
70 % 5 9 8078
50 % 5 9 7420
40 % 5 9 6825
30 % 6 21 2194
Entity #2 | Chains: I
FRAGMENT OF IODOTYROSTATIN protein, length: 3 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures