Sequence Similarity Clusters for the Entities in PDB 1G8W

Entity #1 | Chains: A,B,C,D
LEUCOAGGLUTINATING PHYTOHEMAGGLUTININ protein, length: 233 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 8610
95 % 1 2 8867 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.3
PDBFlex
90 % 1 2 8787
70 % 6 10 1266
50 % 66 87 169
40 % 124 159 97
30 % 124 159 109

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.