Sequence Similarity Clusters for the Entities in PDB 1G8W

Entity #1 | Chains: A,B,C,D
LEUCOAGGLUTINATING PHYTOHEMAGGLUTININ protein, length: 233 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 10529
95 % 1 2 10228 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.2
PDBFlex
90 % 1 2 10088
70 % 6 10 1340
50 % 101 123 140
40 % 126 161 106
30 % 126 161 121

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures