Sequence Similarity Clusters for the Entities in PDB 1G8Q

Entity #1 | Chains: A,B
CD81 ANTIGEN, EXTRACELLULAR DOMAIN protein, length: 90 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 4 11228
95 % 2 9 2893 Flexibility: Low
Max RMSD: 3.3, Avg RMSD: 2.0
PDBFlex
90 % 2 9 2951
70 % 3 12 2318
50 % 3 12 2300
40 % 3 12 2277
30 % 3 12 2138

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures