Sequence Similarity Clusters for the Entities in PDB 1G8K

Entity #1 | Chains: A,C,E,G
ARSENITE OXIDASE protein, length: 825 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 17029
95 % 1 2 11365 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.3
PDBFlex
90 % 1 2 11217
70 % 1 2 10632
50 % 1 2 9621
40 % 1 3 5755
30 % 1 3 5181
Entity #2 | Chains: B,D,F,H
ARSENITE OXIDASE protein, length: 133 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 24038
95 % 1 2 13492 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.2
PDBFlex
90 % 1 2 13266
70 % 1 2 12466
50 % 1 2 11109
40 % 1 2 10061
30 % 1 2 8772

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures