Sequence Similarity Clusters for the Entities in PDB 1G8K

Entity #1 | Chains: A,C,E,G
ARSENITE OXIDASE protein, length: 825 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 16445
95 % 1 2 11009 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.3
PDBFlex
90 % 1 2 10859
70 % 1 2 10307
50 % 1 2 9335
40 % 1 3 5599
30 % 1 3 5036
Entity #2 | Chains: B,D,F,H
ARSENITE OXIDASE protein, length: 133 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 23258
95 % 1 2 13077 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.2
PDBFlex
90 % 1 2 12857
70 % 1 2 12104
50 % 1 2 10792
40 % 1 2 9788
30 % 1 2 8535

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures