Sequence Similarity Clusters for the Entities in PDB 1G8K

Entity #1 | Chains: A,C,E,G
ARSENITE OXIDASE protein, length: 825 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 16737
95 % 1 2 11168 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.3
PDBFlex
90 % 1 2 11021
70 % 1 2 10460
50 % 1 2 9471
40 % 1 3 5674
30 % 1 3 5101
Entity #2 | Chains: B,D,F,H
ARSENITE OXIDASE protein, length: 133 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 23661
95 % 1 2 13270 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.2
PDBFlex
90 % 1 2 13050
70 % 1 2 12282
50 % 1 2 10948
40 % 1 2 9923
30 % 1 2 8651

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures