Sequence Similarity Clusters for the Entities in PDB 1G8J

Entity #1 | Chains: A,C
ARSENITE OXIDASE protein, length: 825 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 42861
95 % 2 2 12150 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.3
PDBFlex
90 % 2 2 11970
70 % 2 2 11303
50 % 2 2 10123
40 % 2 4 4354
30 % 2 4 3924
Entity #2 | Chains: B,D
ARSENITE OXIDASE protein, length: 133 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 45349
95 % 2 2 12151 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.2
PDBFlex
90 % 2 2 11971
70 % 2 2 11304
50 % 2 2 10124
40 % 2 3 6351
30 % 2 3 5539

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures