Sequence Similarity Clusters for the Entities in PDB 1G8J

Entity #1 | Chains: A,C
ARSENITE OXIDASE protein, length: 825 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 31716
95 % 2 2 11381 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.3
PDBFlex
90 % 2 2 11233
70 % 2 2 10645
50 % 2 2 9629
40 % 2 3 5763
30 % 2 3 5187
Entity #2 | Chains: B,D
ARSENITE OXIDASE protein, length: 133 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 46676
95 % 2 2 13508 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.2
PDBFlex
90 % 2 2 13282
70 % 2 2 12478
50 % 2 2 11116
40 % 2 2 10068
30 % 2 2 8776

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures