Sequence Similarity Clusters for the Entities in PDB 1G8J

Entity #1 | Chains: A,C
ARSENITE OXIDASE protein, length: 825 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 31293
95 % 2 2 11197 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.3
PDBFlex
90 % 2 2 11050
70 % 2 2 10482
50 % 2 2 9492
40 % 2 3 5682
30 % 2 3 5109
Entity #2 | Chains: B,D
ARSENITE OXIDASE protein, length: 133 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 46071
95 % 2 2 13292 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.2
PDBFlex
90 % 2 2 13072
70 % 2 2 12299
50 % 2 2 10962
40 % 2 2 9935
30 % 2 2 8661

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures