Sequence Similarity Clusters for the Entities in PDB 1G88

Entity #1 | Chains: A,B,C
SMAD4 protein, length: 268 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 27025
95 % 2 2 12122 Flexibility: Low
Max RMSD: 3.2, Avg RMSD: 2.1
PDBFlex
90 % 2 2 11951
70 % 2 2 11296
50 % 2 2 10121
40 % 2 2 9196
30 % 2 2 8040

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures