Sequence Similarity Clusters for the Entities in PDB 1G88

Entity #1 | Chains: A,B,C
SMAD4 protein, length: 268 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 26661
95 % 2 2 11959 Flexibility: Low
Max RMSD: 3.2, Avg RMSD: 2.1
PDBFlex
90 % 2 2 11801
70 % 2 2 11162
50 % 2 2 10000
40 % 2 2 9089
30 % 2 2 7940

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.