Sequence Similarity Clusters for the Entities in PDB 1G7M

Entity #1 | Chains: A
ANTI-HEN EGG WHITE LYSOZYME MONOCLONAL ANTIBODY D1.3 protein, length: 107 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 9 12 6124
95 % 12 17 3963 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.3
PDBFlex
90 % 12 21 3158
70 % 63 215 66
50 % 90 319 21
40 % 98 363 27
30 % 1262 7240 1
Entity #2 | Chains: B
ANTI-HEN EGG WHITE LYSOZYME MONOCLONAL ANTIBODY D1.3 protein, length: 116 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 12 15 4412
95 % 12 17 3994 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.4
PDBFlex
90 % 12 17 3993
70 % 24 76 542
50 % 179 613 6
40 % 1029 5806 1
30 % 1263 7240 1
Entity #3 | Chains: C
LYSOZYME C protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 498 717 3
95 % 513 734 3 Flexibility: No
Max RMSD: 2.0, Avg RMSD: 0.5
PDBFlex
90 % 522 751 5
70 % 706 974 7
50 % 709 982 8
40 % 722 1017 10
30 % 722 1017 20

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures