Sequence Similarity Clusters for the Entities in PDB 1G7M

Entity #1 | Chains: A
ANTI-HEN EGG WHITE LYSOZYME MONOCLONAL ANTIBODY D1.3 protein, length: 107 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 68960
95 % 12 17 3806 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.3
PDBFlex
90 % 12 21 3024
70 % 59 191 72
50 % 88 308 21
40 % 264 929 5
30 % 296 1056 7
Entity #2 | Chains: B
ANTI-HEN EGG WHITE LYSOZYME MONOCLONAL ANTIBODY D1.3 protein, length: 116 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 9 11 5842
95 % 12 17 3802 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.4
PDBFlex
90 % 12 17 3850
70 % 12 36 1251
50 % 169 576 7
40 % 265 929 5
30 % 297 1056 7
Entity #3 | Chains: C
LYSOZYME C protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 449 660 3
95 % 495 713 4 Flexibility: Low
Max RMSD: 2.0, Avg RMSD: 0.5
PDBFlex
90 % 504 730 5
70 % 687 950 7
50 % 690 958 8
40 % 702 992 11
30 % 702 992 20

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.