Sequence Similarity Clusters for the Entities in PDB 1G7L

Entity #1 | Chains: A
ANTI-HEN EGG WHITE LYSOZYME MONOCLONAL ANTIBODY D1.3 protein, length: 107 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 71068
95 % 17 17 3948 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.3
PDBFlex
90 % 17 21 3139
70 % 76 193 75
50 % 117 312 23
40 % 341 956 5
30 % 385 1085 7
Entity #2 | Chains: B
ANTI-HEN EGG WHITE LYSOZYME MONOCLONAL ANTIBODY D1.3 protein, length: 116 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 11 11 6061
95 % 17 17 3944 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.4
PDBFlex
90 % 17 17 3999
70 % 32 76 538
50 % 211 599 6
40 % 342 956 5
30 % 386 1085 7
Entity #3 | Chains: C
LYSOZYME C protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 528 668 3
95 % 578 721 4 Flexibility: Low
Max RMSD: 2.0, Avg RMSD: 0.5
PDBFlex
90 % 588 738 5
70 % 790 961 7
50 % 794 969 8
40 % 813 1003 11
30 % 813 1003 20

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures