Sequence Similarity Clusters for the Entities in PDB 1G7L

Entity #1 | Chains: A
ANTI-HEN EGG WHITE LYSOZYME MONOCLONAL ANTIBODY D1.3 protein, length: 107 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 40903
95 % 17 17 4196 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.3
PDBFlex
90 % 17 21 3334
70 % 83 223 72
50 % 120 339 19
40 % 134 383 27
30 % 1981 7653 1
Entity #2 | Chains: B
ANTI-HEN EGG WHITE LYSOZYME MONOCLONAL ANTIBODY D1.3 protein, length: 116 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 15 15 4689
95 % 17 17 4234 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.4
PDBFlex
90 % 17 17 4279
70 % 32 76 578
50 % 228 659 6
40 % 1629 6175 1
30 % 1982 7653 1
Entity #3 | Chains: C
LYSOZYME C protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 603 750 3
95 % 618 767 3 Flexibility: No
Max RMSD: 2.0, Avg RMSD: 0.5
PDBFlex
90 % 628 784 5
70 % 831 1008 7
50 % 836 1017 8
40 % 856 1052 10
30 % 856 1052 19

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures