Sequence Similarity Clusters for the Entities in PDB 1G7J

Entity #1 | Chains: A
ANTI-HEN EGG WHITE LYSOZYME MONOCLONAL ANTIBODY D1.3 protein, length: 107 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 69810
95 % 3 17 3862 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.3
PDBFlex
90 % 3 21 3066
70 % 26 191 73
50 % 47 308 22
40 % 158 936 5
30 % 174 1065 7
Entity #2 | Chains: B
ANTI-HEN EGG WHITE LYSOZYME MONOCLONAL ANTIBODY D1.3 protein, length: 116 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 11 5926
95 % 3 17 3858 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.4
PDBFlex
90 % 3 17 3905
70 % 3 36 1263
50 % 106 583 7
40 % 159 936 5
30 % 175 1065 7
Entity #3 | Chains: C
LYSOZYME C protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 351 665 3
95 % 387 718 4 Flexibility: Low
Max RMSD: 2.0, Avg RMSD: 0.5
PDBFlex
90 % 394 735 5
70 % 550 955 7
50 % 550 963 8
40 % 553 997 11
30 % 553 997 20

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures