Sequence Similarity Clusters for the Entities in PDB 1G70

Entity #1 | Chains: A
HIV-1 RRE-IIB 32 NUCLEOTIDE RNA rna, length: 32 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: B
RSG-1.2 PEPTIDE protein, length: 22 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 77303
95 % 1 1 53923
90 % 1 1 51088
70 % 1 1 44690
50 % 1 1 38141
40 % 1 1 33667
30 % 1 1 28606

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures