Sequence Similarity Clusters for the Entities in PDB 1G5Y

Entity #1 | Chains: A,B,C,D
RETINOIC ACID RECEPTOR RXR-ALPHA protein, length: 238 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 20 63 292
95 % 21 67 351 Flexibility: Medium
Max RMSD: 13.2, Avg RMSD: 4.4
PDBFlex
90 % 22 69 362
70 % 22 85 313
50 % 22 85 377
40 % 24 98 323
30 % 512 1305 8

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures