Sequence Similarity Clusters for the Entities in PDB 1G4Y

Entity #1 | Chains: B
CALCIUM-ACTIVATED POTASSIUM CHANNEL RSK2 protein, length: 101 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 9 8165
95 % 5 11 6694 Flexibility: Low
Max RMSD: 2.7, Avg RMSD: 0.6
PDBFlex
90 % 5 11 6685
70 % 5 11 6481
50 % 5 11 6034
40 % 5 11 5613
30 % 5 11 4935
Entity #2 | Chains: R
CALMODULIN protein, length: 148 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 16 186 60
95 % 16 190 80 Flexibility: Medium
Max RMSD: 20.3, Avg RMSD: 9.7
PDBFlex
90 % 21 203 77
70 % 22 205 93
50 % 22 238 105
40 % 23 361 40
30 % 32 432 43

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures