Sequence Similarity Clusters for the Entities in PDB 1G4Y

Entity #1 | Chains: B
CALCIUM-ACTIVATED POTASSIUM CHANNEL RSK2 protein, length: 101 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 9 7778
95 % 5 11 6735 Flexibility: Low
Max RMSD: 2.7, Avg RMSD: 0.9
PDBFlex
90 % 5 11 6727
70 % 5 11 6549
50 % 5 11 6110
40 % 5 11 5717
30 % 5 11 5138
Entity #2 | Chains: R
CALMODULIN protein, length: 148 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 16 149 96
95 % 16 187 82 Flexibility: Medium
Max RMSD: 20.3, Avg RMSD: 9.6
PDBFlex
90 % 21 200 81
70 % 22 202 96
50 % 22 235 105
40 % 23 358 41
30 % 24 385 50

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures