Sequence Similarity Clusters for the Entities in PDB 1G4U

Entity #1 | Chains: S
PROTEIN TYROSINE PHOSPHATASE SPTP protein, length: 383 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 33708
95 % 1 2 26978 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 1.7
PDBFlex
90 % 1 2 26064
70 % 1 2 23621
50 % 1 2 20332
40 % 1 2 18042
30 % 1 2 15436
Entity #2 | Chains: R
RAS-RELATED C3 BOTULINUM TOXIN SUBSTRATE 1 protein, length: 184 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 5 7206
95 % 17 38 649 Flexibility: Low
Max RMSD: 4.6, Avg RMSD: 1.3
PDBFlex
90 % 19 40 624
70 % 28 78 319
50 % 59 137 189
40 % 60 138 205
30 % 459 775 16

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.