Sequence Similarity Clusters for the Entities in PDB 1G4U

Entity #1 | Chains: S
PROTEIN TYROSINE PHOSPHATASE SPTP protein, length: 383 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 34184
95 % 1 2 27349 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 1.7
PDBFlex
90 % 1 2 26410
70 % 1 2 23907
50 % 1 2 20566
40 % 1 2 18249
30 % 1 2 15614
Entity #2 | Chains: R
RAS-RELATED C3 BOTULINUM TOXIN SUBSTRATE 1 protein, length: 184 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 5 7314
95 % 17 39 630 Flexibility: Low
Max RMSD: 4.6, Avg RMSD: 1.3
PDBFlex
90 % 19 41 628
70 % 28 79 333
50 % 61 141 192
40 % 62 142 204
30 % 475 797 16

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures