Sequence Similarity Clusters for the Entities in PDB 1G4U

Entity #1 | Chains: S
PROTEIN TYROSINE PHOSPHATASE SPTP protein, length: 383 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 41679
95 % 1 2 35021 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 1.7
PDBFlex
90 % 1 2 32277
70 % 1 2 28832
50 % 1 2 24660
40 % 1 2 21680
30 % 1 2 18091
Entity #2 | Chains: R
RAS-RELATED C3 BOTULINUM TOXIN SUBSTRATE 1 protein, length: 184 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 5 8234
95 % 17 40 625 Flexibility: Low
Max RMSD: 4.6, Avg RMSD: 1.3
PDBFlex
90 % 19 42 623
70 % 28 82 332
50 % 62 145 194
40 % 62 145 210
30 % 509 842 13

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures