Sequence Similarity Clusters for the Entities in PDB 1G4B

Entity #1 | Chains: E,F,K,L
ATP-DEPENDENT HSL PROTEASE ATP-BINDING SUBUNIT HSLU protein, length: 443 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 11 11 782
95 % 12 12 919 Flexibility: Low
Max RMSD: 16.5, Avg RMSD: 2.1
PDBFlex
90 % 12 12 947
70 % 16 16 618
50 % 18 18 617
40 % 18 18 657
30 % 27 27 459
Entity #2 | Chains: M,N,O,P
ATP-DEPENDENT PROTEASE HSLV protein, length: 175 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 9 9 1083
95 % 10 10 980 Flexibility: Low
Max RMSD: 3.2, Avg RMSD: 0.7
PDBFlex
90 % 10 10 1009
70 % 16 16 528
50 % 23 23 385
40 % 23 23 413
30 % 23 23 410

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures