Sequence Similarity Clusters for the Entities in PDB 1G4A

Entity #1 | Chains: E,F
ATP-DEPENDENT HSL PROTEASE ATP-BINDING SUBUNIT HSLU protein, length: 443 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 11 692
95 % 5 12 903 Flexibility: Low
Max RMSD: 4.7, Avg RMSD: 2.0
PDBFlex
90 % 5 12 939
70 % 7 16 611
50 % 7 16 661
40 % 7 16 690
30 % 7 16 685
Entity #2 | Chains: A,B,C,D
ATP-DEPENDENT PROTEASE HSLV protein, length: 175 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 9 935
95 % 6 10 968 Flexibility: Low
Max RMSD: 3.2, Avg RMSD: 0.7
PDBFlex
90 % 6 10 999
70 % 10 16 521
50 % 16 23 378
40 % 16 23 399
30 % 16 23 403

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures