Sequence Similarity Clusters for the Entities in PDB 1G4A

Entity #1 | Chains: E,F
ATP-DEPENDENT HSL PROTEASE ATP-BINDING SUBUNIT HSLU protein, length: 443 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 11 657
95 % 5 12 849 Flexibility: Low
Max RMSD: 4.7, Avg RMSD: 2.1
PDBFlex
90 % 5 12 881
70 % 7 16 582
50 % 7 16 628
40 % 7 16 657
30 % 7 16 653
Entity #2 | Chains: A,B,C,D
ATP-DEPENDENT PROTEASE HSLV protein, length: 175 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 9 890
95 % 6 10 921 Flexibility: Low
Max RMSD: 3.2, Avg RMSD: 0.7
PDBFlex
90 % 6 10 953
70 % 10 16 448
50 % 16 23 329
40 % 16 23 350
30 % 16 23 357

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.